IL_5AKA_068

3D structure

PDB id

5AKA (explore in PDB, NAKB, or RNA 3D Hub)

Description

EM structure of ribosome-SRP-FtsY complex in closed state

Experimental method

ELECTRON MICROSCOPY

Resolution

5.7 Å

Loop

Sequence

CGUGUAG*UGAGGCG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5AKA|1|B|C|1472
5AKA|1|B|G|1473
5AKA|1|B|U|1474
5AKA|1|B|G|1475
5AKA|1|B|U|1476
5AKA|1|B|A|1477
5AKA|1|B|G|1478
*
5AKA|1|B|U|1513
5AKA|1|B|G|1514
5AKA|1|B|A|1515
5AKA|1|B|G|1516
5AKA|1|B|G|1517
5AKA|1|B|C|1518
5AKA|1|B|G|1519

Current chains

Chain B

23S ribosomal RNA

Nearby chains