IL_5AN9_012

3D structure

PDB id

5AN9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanism of eIF6 release from the nascent 60S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UUAAGACAG*CCAAA

Length

14 nucleotides

Bulged bases

5AN9|1|N|A|1456

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_01890.1

Basepair signature

cWW-tSS-L-tSH-tSS-tHS-L-bif-cWW

Number of instances in this motif group

9

Unit IDs

5AN9|1|N|U|1453
5AN9|1|N|U|1454
5AN9|1|N|A|1455
5AN9|1|N|A|1456
5AN9|1|N|G|1457
5AN9|1|N|A|1458
5AN9|1|N|C|1459
5AN9|1|N|A|1460
5AN9|1|N|G|1461
*
5AN9|1|N|C|1518
5AN9|1|N|C|1519
5AN9|1|N|A|1520
5AN9|1|N|A|1521
5AN9|1|N|A|1522

Current chains

Chain N

26S RIBOSOMAL RNA

Nearby chains

Chain C

60S ACIDIC RIBOSOMAL PROTEIN P0

Chain H

UBIQUITIN-60S RIBOSOMAL PROTEIN L40