IL_5AN9_022

3D structure

PDB id

5AN9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanism of eIF6 release from the nascent 60S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CCAAAUGCCUCG*CGCG

Length

16 nucleotides

Bulged bases

5AN9|1|N|A|2547, 5AN9|1|N|C|2553, 5AN9|1|N|C|2572

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_62969.1

Basepair signature

cWW-L-R-cHW-L-L-L-L-L-cWW

Number of instances in this motif group

9

Unit IDs

5AN9|1|N|C|2543
5AN9|1|N|C|2544
5AN9|1|N|A|2545
5AN9|1|N|A|2546
5AN9|1|N|A|2547
5AN9|1|N|U|2548
5AN9|1|N|G|2549
5AN9|1|N|C|2550
5AN9|1|N|C|2551
5AN9|1|N|U|2552
5AN9|1|N|C|2553
5AN9|1|N|G|2554
*
5AN9|1|N|C|2570
5AN9|1|N|G|2571
5AN9|1|N|C|2572
5AN9|1|N|G|2573

Current chains

Chain N

26S RIBOSOMAL RNA

Nearby chains

Chain J

RIBOSOME MATURATION PROTEIN SBDS