IL_5AN9_031

3D structure

PDB id

5AN9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanism of eIF6 release from the nascent 60S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GAU*AC

Length

5 nucleotides

Bulged bases

5AN9|1|N|A|3048

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5AN9_031 not in the Motif Atlas

Geometric match to IL_5TBW_013

Geometric discrepancy: 0.2142

The information below is about IL_5TBW_013

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_31462.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

127

Unit IDs

5AN9|1|N|G|3047
5AN9|1|N|A|3048
5AN9|1|N|U|3049
*
5AN9|1|N|A|3073
5AN9|1|N|C|3074

Current chains

Chain N

26S RIBOSOMAL RNA

Nearby chains