IL_5AN9_048

3D structure

PDB id

5AN9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanism of eIF6 release from the nascent 60S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UCACU*ACCA

Length

9 nucleotides

Bulged bases

5AN9|1|N|C|3428

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_42675.1

Basepair signature

cWW-tWH-cSH-L-cWS-cWW

Number of instances in this motif group

38

Unit IDs

5AN9|1|N|U|3383
5AN9|1|N|C|3384
5AN9|1|N|A|3385
5AN9|1|N|C|3386
5AN9|1|N|U|3387
*
5AN9|1|N|A|3427
5AN9|1|N|C|3428
5AN9|1|N|C|3429
5AN9|1|N|A|3430

Current chains

Chain N

26S RIBOSOMAL RNA

Nearby chains

Chain A

60S RIBOSOMAL PROTEIN L3

Chain E

60S RIBOSOMAL PROTEIN L23

Chain G

60S RIBOSOMAL PROTEIN L24