IL_5AN9_056

3D structure

PDB id

5AN9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanism of eIF6 release from the nascent 60S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UUUCG*CAG

Length

8 nucleotides

Bulged bases

5AN9|1|N|U|1231

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5AN9_056 not in the Motif Atlas

Homologous match to IL_8CRE_477

Geometric discrepancy: 0.5121

The information below is about IL_8CRE_477

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_31737.3

Basepair signature

cWW-L-cWW

Number of instances in this motif group

12

Unit IDs

5AN9|1|N|U|1229
5AN9|1|N|U|1230
5AN9|1|N|U|1231
5AN9|1|N|C|1232
5AN9|1|N|G|1233
*
5AN9|1|N|C|1249
5AN9|1|N|A|1250
5AN9|1|N|G|1251

Current chains

Chain N

26S RIBOSOMAL RNA

Nearby chains

Chain F

60S RIBOSOMAL PROTEIN L10