IL_5APN_010

3D structure

PDB id

5APN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast 60S ribosomal subunit in complex with Arx1, Alb1 and N-terminally tagged Rei1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.91 Å

Loop

Sequence

UGG*CUUUGUA

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5APN|1|5|U|169
5APN|1|5|G|170
5APN|1|5|G|171
*
5APN|1|5|C|247
5APN|1|5|U|248
5APN|1|5|U|249
5APN|1|5|U|250
5APN|1|5|G|251
5APN|1|5|U|252
5APN|1|5|A|253

Current chains

Chain 5

25S rRNA

Nearby chains

Chain L

60S ribosomal protein L13-A

Chain h

60S ribosomal protein L35-A