IL_5APN_092

3D structure

PDB id

5APN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast 60S ribosomal subunit in complex with Arx1, Alb1 and N-terminally tagged Rei1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.91 Å

Loop

Sequence

CAAAUGCCUCG*CGCG

Length

15 nucleotides

Bulged bases

5APN|1|5|A|2281, 5APN|1|5|C|2287, 5APN|1|5|C|2306

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5APN|1|5|C|2278
5APN|1|5|A|2279
5APN|1|5|A|2280
5APN|1|5|A|2281
5APN|1|5|U|2282
5APN|1|5|G|2283
5APN|1|5|C|2284
5APN|1|5|C|2285
5APN|1|5|U|2286
5APN|1|5|C|2287
5APN|1|5|G|2288
*
5APN|1|5|C|2304
5APN|1|5|G|2305
5APN|1|5|C|2306
5APN|1|5|G|2307

Current chains

Chain 5

25S rRNA

Nearby chains