IL_5CZP_120

3D structure

PDB id

5CZP (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S termination complex containing E. coli RF2

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

UG*CAACAAG

Length

9 nucleotides

Bulged bases

5CZP|1|RA|C|1509|||A

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5CZP_120 not in the Motif Atlas

Homologous match to IL_7RQB_061

Geometric discrepancy: 0.2367

The information below is about IL_7RQB_061

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_52493.1

Basepair signature

cWW-L-cWW-L-L

Number of instances in this motif group

2

Unit IDs

5CZP|1|RA|U|1481
5CZP|1|RA|G|1482
*
5CZP|1|RA|C|1506
5CZP|1|RA|A|1507
5CZP|1|RA|A|1508
5CZP|1|RA|C|1509|||A
5CZP|1|RA|A|1509|||B
5CZP|1|RA|A|1509|||C
5CZP|1|RA|G|1510

Current chains

Chain RA

23S rRNA

Nearby chains