IL_5CZP_142

3D structure

PDB id

5CZP (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S termination complex containing E. coli RF2

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GGAG*CGCCGGUGAAAUAC

Length

18 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5CZP_142 not in the Motif Atlas

Homologous match to IL_7RQB_086

Geometric discrepancy: 0.1928

The information below is about IL_7RQB_086

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5CZP|1|RA|G|2124
5CZP|1|RA|G|2125
5CZP|1|RA|A|2126
5CZP|1|RA|G|2127
*
5CZP|1|RA|C|2161
5CZP|1|RA|G|2162
5CZP|1|RA|C|2163
5CZP|1|RA|C|2164
5CZP|1|RA|G|2165
5CZP|1|RA|G|2166
5CZP|1|RA|U|2167
5CZP|1|RA|G|2168
5CZP|1|RA|A|2169
5CZP|1|RA|A|2170
5CZP|1|RA|A|2171
5CZP|1|RA|U|2172
5CZP|1|RA|A|2173
5CZP|1|RA|C|2174

Current chains

Chain RA

23S rRNA

Nearby chains