IL_5CZP_158
3D structure
- PDB id
- 5CZP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S termination complex containing E. coli RF2
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- UUGAG*CAAGAUGAG
- Length
- 14 nucleotides
- Bulged bases
- 5CZP|1|RA|G|2780
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5CZP_158 not in the Motif Atlas
- Homologous match to IL_7RQB_102
- Geometric discrepancy: 0.045
- The information below is about IL_7RQB_102
- Detailed Annotation
- tSH-tHS-tHW
- Broad Annotation
- tSH-tHS-tHW
- Motif group
- IL_04638.1
- Basepair signature
- cWW-tSH-tHW-tHS-cSH-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
5CZP|1|RA|U|2636
5CZP|1|RA|U|2637
5CZP|1|RA|G|2638
5CZP|1|RA|A|2639
5CZP|1|RA|G|2640
*
5CZP|1|RA|C|2774
5CZP|1|RA|A|2775
5CZP|1|RA|A|2776
5CZP|1|RA|G|2777
5CZP|1|RA|A|2778
5CZP|1|RA|U|2779
5CZP|1|RA|G|2780
5CZP|1|RA|A|2781
5CZP|1|RA|G|2782
Current chains
- Chain RA
- 23S rRNA
Nearby chains
- Chain RE
- 50S ribosomal protein L3
- Chain RN
- 50S ribosomal protein L13
Coloring options: