IL_5CZP_241

3D structure

PDB id

5CZP (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S termination complex containing E. coli RF2

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CGGACAC*GUG

Length

10 nucleotides

Bulged bases

5CZP|1|YA|C|277

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5CZP_241 not in the Motif Atlas

Homologous match to IL_8VTW_009

Geometric discrepancy: 0.4838

The information below is about IL_8VTW_009

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_45612.4

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

14

Unit IDs

5CZP|1|YA|C|273|||K
5CZP|1|YA|G|274
5CZP|1|YA|G|275
5CZP|1|YA|A|276
5CZP|1|YA|C|277
5CZP|1|YA|A|278
5CZP|1|YA|C|279
*
5CZP|1|YA|G|361
5CZP|1|YA|U|362
5CZP|1|YA|G|363|||A

Current chains

Chain YA

23S rRNA

Nearby chains