IL_5DFE_342
3D structure
- PDB id
- 5DFE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S termination complex containing E. coli RF2
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- UGUAAG*UUGAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5DFE_342 not in the Motif Atlas
- Homologous match to IL_7RQB_110
- Geometric discrepancy: 0.0541
- The information below is about IL_7RQB_110
- Detailed Annotation
- tHS double platform
- Broad Annotation
- No text annotation
- Motif group
- IL_83162.5
- Basepair signature
- cWW-tSH-L-tHH-L-cWW
- Number of instances in this motif group
- 7
Unit IDs
5DFE|1|YA|U|2847
5DFE|1|YA|G|2848
5DFE|1|YA|U|2849
5DFE|1|YA|A|2850
5DFE|1|YA|A|2851
5DFE|1|YA|G|2852
*
5DFE|1|YA|U|2865
5DFE|1|YA|U|2866
5DFE|1|YA|G|2867
5DFE|1|YA|A|2868
5DFE|1|YA|G|2869
Current chains
- Chain YA
- T23S rRNA
Nearby chains
- Chain YR
- 50S ribosomal protein L17
- Chain YT
- 50S ribosomal protein L19
Coloring options: