IL_5DGE_070
3D structure
- PDB id
- 5DGE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.45 Å
Loop
- Sequence
- UUAAC*GGAAGA
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5DGE_070 not in the Motif Atlas
- Homologous match to IL_5TBW_071
- Geometric discrepancy: 0.061
- The information below is about IL_5TBW_071
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_69313.1
- Basepair signature
- cWW-tWH-tHH-tHS-cWW
- Number of instances in this motif group
- 2
Unit IDs
5DGE|1|1|U|1694
5DGE|1|1|U|1695
5DGE|1|1|A|1696
5DGE|1|1|A|1697
5DGE|1|1|C|1698
*
5DGE|1|1|G|1747
5DGE|1|1|G|1748
5DGE|1|1|A|1749
5DGE|1|1|A|1750
5DGE|1|1|G|1751
5DGE|1|1|A|1752
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain O4
- 60S ribosomal protein L34-A
- Chain O8
- 60S ribosomal protein L38
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