3D structure

PDB id
5E7K (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-site
Experimental method
X-RAY DIFFRACTION
Resolution
3.2 Å

Loop

Sequence
CGG*CCCG
Length
7 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_5E7K_210 not in the Motif Atlas
Geometric match to IL_6CZR_136
Geometric discrepancy: 0.3568
The information below is about IL_6CZR_136
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_05564.3
Basepair signature
cWW-cSH-cWW-cWW
Number of instances in this motif group
14

Unit IDs

5E7K|1|1G|C|656
5E7K|1|1G|G|657
5E7K|1|1G|G|658
*
5E7K|1|1G|C|747
5E7K|1|1G|C|748
5E7K|1|1G|C|749
5E7K|1|1G|G|750

Current chains

Chain 1G
16S rRNA

Nearby chains

Chain 6A
30S ribosomal protein S15

Coloring options:


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