IL_5E7K_263
3D structure
- PDB id
- 5E7K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- UUAAG*CGGAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5E7K_263 not in the Motif Atlas
- Homologous match to IL_4WF9_019
- Geometric discrepancy: 0.0883
- The information below is about IL_4WF9_019
- Detailed Annotation
- AAA cross-strand stack
- Broad Annotation
- AAA cross-strand stack
- Motif group
- IL_66798.2
- Basepair signature
- cWW-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
5E7K|1|1H|U|606
5E7K|1|1H|U|607
5E7K|1|1H|A|608
5E7K|1|1H|A|609
5E7K|1|1H|G|609|||A
*
5E7K|1|1H|C|618|||A
5E7K|1|1H|G|619
5E7K|1|1H|G|620
5E7K|1|1H|A|621
5E7K|1|1H|G|622
Current chains
- Chain 1H
- 23S rRNA
Nearby chains
- Chain 31
- 50S ribosomal protein L4
- Chain 78
- 50S ribosomal protein L15
Coloring options: