IL_5E81_211
3D structure
- PDB id
- 5E81 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pair
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.95 Å
Loop
- Sequence
- UGAAAGAC*GGGGAG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5E81_211 not in the Motif Atlas
- Homologous match to IL_4LFB_026
- Geometric discrepancy: 0.2914
- The information below is about IL_4LFB_026
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_78349.3
- Basepair signature
- cWW-L-R-L-R-L-R-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
5E81|1|1G|U|605
5E81|1|1G|G|606
5E81|1|1G|A|607
5E81|1|1G|A|608
5E81|1|1G|A|609
5E81|1|1G|G|610
5E81|1|1G|A|611
5E81|1|1G|C|612
*
5E81|1|1G|G|628
5E81|1|1G|G|629
5E81|1|1G|G|630
5E81|1|1G|G|631
5E81|1|1G|A|632
5E81|1|1G|G|633
Current chains
- Chain 1G
- 16S ribosomal RNA
Nearby chains
- Chain 32
- 30S ribosomal protein S4
- Chain 72
- 30S ribosomal protein S8
- Chain 7A
- 30S ribosomal protein S16
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