3D structure

PDB id
5E81 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pair
Experimental method
X-RAY DIFFRACTION
Resolution
2.95 Å

Loop

Sequence
GUU*AAU
Length
6 nucleotides
Bulged bases
None detected
QA status
Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
Self complementary
Broad Annotation
Self complementary
Motif group
IL_86319.3
Basepair signature
cWW-cWW-cWW
Number of instances in this motif group
269

Unit IDs

5E81|1|1K|G|27
5E81|1|1K|U|28
5E81|1|1K|U|29
*
5E81|1|1K|A|41
5E81|1|1K|A|42
5E81|1|1K|U|43

Current chains

Chain 1K
tRNA-Lys

Nearby chains

Chain 13
Small subunit ribosomal RNA; SSU rRNA
Chain 4I
30S ribosomal protein S13

Coloring options:

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