IL_5EL4_043
3D structure
- PDB id
- 5EL4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.15 Å
Loop
- Sequence
- CUGCAU*AUGG
- Length
- 10 nucleotides
- Bulged bases
- 5EL4|1|13|C|1054
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5EL4_043 not in the Motif Atlas
- Geometric match to IL_4V88_473
- Geometric discrepancy: 0.311
- The information below is about IL_4V88_473
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_36174.1
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 15
Unit IDs
5EL4|1|13|C|1051
5EL4|1|13|U|1052
5EL4|1|13|G|1053
5EL4|1|13|C|1054
5EL4|1|13|A|1055
5EL4|1|13|U|1056
*
5EL4|1|13|A|1204
5EL4|1|13|U|1205
5EL4|1|13|G|1206
5EL4|1|13|G|1207
Current chains
- Chain 13
- 16S ribosomal RNA
Nearby chains
- Chain 1I
- 30S ribosomal protein S10
- Chain 1K
- Transfer RNA; tRNA
- Chain 2E
- 30S ribosomal protein S3
- Chain 4K
- mRNA
- Chain 5I
- 30S ribosomal protein S14 type Z
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