3D structure

PDB id
5EL5 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position
Experimental method
X-RAY DIFFRACTION
Resolution
3.15 Å

Loop

Sequence
GAUAG*CUGUC
Length
10 nucleotides
Bulged bases
None detected
QA status
Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

5EL5|1|14|G|869
5EL5|1|14|A|870
5EL5|1|14|U|871
5EL5|1|14|A|872
5EL5|1|14|G|873
*
5EL5|1|14|C|904
5EL5|1|14|U|905
5EL5|1|14|G|906
5EL5|1|14|U|907
5EL5|1|14|C|908

Current chains

Chain 14
23S ribosomal RNA

Nearby chains

Chain 1L
Transfer RNA; tRNA
Chain 45
50S ribosomal protein L16
Chain D5
50S ribosomal protein L25

Coloring options:

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