IL_5EL5_100
3D structure
- PDB id
- 5EL5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.15 Å
Loop
- Sequence
- GCCA*UGC
- Length
- 7 nucleotides
- Bulged bases
- 5EL5|1|14|C|995
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5EL5_100 not in the Motif Atlas
- Geometric match to IL_7A0S_078
- Geometric discrepancy: 0.3686
- The information below is about IL_7A0S_078
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_71625.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 65
Unit IDs
5EL5|1|14|G|993
5EL5|1|14|C|994
5EL5|1|14|C|995
5EL5|1|14|A|996
*
5EL5|1|14|U|1159
5EL5|1|14|G|1160
5EL5|1|14|C|1161
Current chains
- Chain 14
- 23S ribosomal RNA
Nearby chains
- Chain 15
- 50S ribosomal protein L13
- Chain 85
- 50S ribosomal protein L20
- Chain 95
- 50S ribosomal protein L21
- Chain H5
- 50S ribosomal protein L30
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