IL_5EL7_061
3D structure
- PDB id
- 5EL7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position and antibiotic paromomycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.15 Å
Loop
- Sequence
- CUA*UAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary: CUA,UAG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5EL7_061 not in the Motif Atlas
- Homologous match to IL_4LFB_061
- Geometric discrepancy: 0.1433
- The information below is about IL_4LFB_061
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_86319.3
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 269
Unit IDs
5EL7|1|13|C|1426
5EL7|1|13|U|1427
5EL7|1|13|A|1428
*
5EL7|1|13|U|1472
5EL7|1|13|A|1473
5EL7|1|13|G|1474
Current chains
- Chain 13
- 16S rRNA
Nearby chains
- Chain 1H
- Large subunit ribosomal RNA; LSU rRNA
- Chain 68
- 50S ribosomal protein L14
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