IL_5EL7_095
3D structure
- PDB id
- 5EL7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position and antibiotic paromomycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.15 Å
Loop
- Sequence
- AUAGG*CCUGU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5EL7_095 not in the Motif Atlas
- Geometric match to IL_5TBW_121
- Geometric discrepancy: 0.3905
- The information below is about IL_5TBW_121
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_05145.3
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 13
Unit IDs
5EL7|1|14|A|870
5EL7|1|14|U|871
5EL7|1|14|A|872
5EL7|1|14|G|873
5EL7|1|14|G|874
*
5EL7|1|14|C|903
5EL7|1|14|C|904
5EL7|1|14|U|905
5EL7|1|14|G|906
5EL7|1|14|U|907
Current chains
- Chain 14
- 23S rRNA
Nearby chains
- Chain 45
- 50S ribosomal protein L16
- Chain D5
- 50S ribosomal protein L25
Coloring options: