IL_5FCJ_219
3D structure
- PDB id
- 5FCJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the anisomycin-containing uL3 W255C mutant 80S yeast ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GCCAGCGA*UUGUGAAAC
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5FCJ_219 not in the Motif Atlas
- Geometric match to IL_4V88_459
- Geometric discrepancy: 0.2015
- The information below is about IL_4V88_459
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_10447.1
- Basepair signature
- cWW-tWW-L-R-L-R-L-R-L-tHW-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
5FCJ|1|2|G|1480
5FCJ|1|2|C|1481
5FCJ|1|2|C|1482
5FCJ|1|2|A|1483
5FCJ|1|2|G|1484
5FCJ|1|2|C|1485
5FCJ|1|2|G|1486
5FCJ|1|2|A|1487
*
5FCJ|1|2|U|1519
5FCJ|1|2|U|1520
5FCJ|1|2|G|1521
5FCJ|1|2|U|1522
5FCJ|1|2|G|1523
5FCJ|1|2|A|1524
5FCJ|1|2|A|1525
5FCJ|1|2|A|1526
5FCJ|1|2|C|1527
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain C6
- 40S ribosomal protein S16-A
- Chain C9
- 40S ribosomal protein S19-A
- Chain D0
- 40S ribosomal protein S20
- Chain D9
- 40S ribosomal protein S29-A
- Chain S3
- 40S ribosomal protein S3
- Chain S5
- 40S ribosomal protein S5
Coloring options: