Motif IL_10447.1 Version IL_10447.1 of this group appears in releases 3.80 to 3.88
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | break | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 1-17 | 2-16 | 7-12 | 9-10 | |||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL_4V88_459 | 4V88 | 0.0000 | 0 | A6 | SSU rRNA | U | 1519 | U | 1520 | G | 1521 | U | 1522 | G | 1523 | A | 1524 | A | 1525 | A | 1526 | C | 1527 | * | G | 1480 | C | 1481 | C | 1482 | A | 1483 | G | 1484 | C | 1485 | G | 1486 | A | 1487 | cWW | tWW | tHW | cWW |
2 | IL_8C3A_466 | 8C3A | 0.1014 | 0 | CM | SSU rRNA | U | 1506 | U | 1507 | G | 1508 | U | 1509 | G | 1510 | A | 1511 | A | 1512 | A | 1513 | C | 1514 | * | G | 1466 | C | 1467 | C | 1468 | A | 1469 | G | 1470 | C | 1471 | G | 1472 | A | 1473 | cWW | tWW | tHW | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
UUGUGAAAC*GCCAGCGA | 2 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
UGUGAAA*CCAGCG | 2 |
Release history
Release | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 | 3.87 | 3.88 |
---|---|---|---|---|---|---|---|---|---|
Date | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 | 2024-05-22 | 2024-06-19 | 2024-07-17 | 2024-08-14 | 2024-09-11 |
Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-tWW-L-R-L-R-L-R-L-tHW-R-L-cWW
- Heat map statistics
- Min 0.10 | Avg 0.05 | Max 0.10
Coloring options: