IL_5FCJ_420
3D structure
- PDB id
- 5FCJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the anisomycin-containing uL3 W255C mutant 80S yeast ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GUUAAAA*UC
- Length
- 9 nucleotides
- Bulged bases
- 5FCJ|1|6|A|619, 5FCJ|1|6|A|620
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5FCJ_420 not in the Motif Atlas
- Homologous match to IL_8P9A_405
- Geometric discrepancy: 0.094
- The information below is about IL_8P9A_405
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_20847.1
- Basepair signature
- cWW-L-cWW-L-L-R
- Number of instances in this motif group
- 5
Unit IDs
5FCJ|1|6|G|616
5FCJ|1|6|U|617
5FCJ|1|6|U|618
5FCJ|1|6|A|619
5FCJ|1|6|A|620
5FCJ|1|6|A|621
5FCJ|1|6|A|622
*
5FCJ|1|6|U|1104
5FCJ|1|6|C|1105
Current chains
- Chain 6
- 18S ribosomal RNA
Nearby chains
- Chain d3
- 40S ribosomal protein S23-A
- Chain d6
- 40S ribosomal protein S26-B
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