IL_5FCJ_432

3D structure

PDB id

5FCJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the anisomycin-containing uL3 W255C mutant 80S yeast ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

UGG*CCA

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary: UGG,CCA

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5FCJ_432 not in the Motif Atlas

Geometric match to IL_2H1M_002

Geometric discrepancy: 0.1673

The information below is about IL_2H1M_002

Detailed Annotation

Isolated cWH basepair

Broad Annotation

Isolated cWH basepair

Motif group

IL_10892.2

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

58

Unit IDs

5FCJ|1|6|U|822
5FCJ|1|6|G|823
5FCJ|1|6|G|824
*
5FCJ|1|6|C|848
5FCJ|1|6|C|849
5FCJ|1|6|A|850

Current chains

Chain 6

18S ribosomal RNA

Nearby chains

Chain m9

60S ribosomal protein L19-A