IL_5FCJ_484
3D structure
- PDB id
- 5FCJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the anisomycin-containing uL3 W255C mutant 80S yeast ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- UUCCC*GAUCA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5FCJ_484 not in the Motif Atlas
- Homologous match to IL_8P9A_368
- Geometric discrepancy: 0.0937
- The information below is about IL_8P9A_368
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_58103.12
- Basepair signature
- cWW-cSH-cWS-L-tSW-R-R-cWW
- Number of instances in this motif group
- 12
Unit IDs
5FCJ|1|7|U|32
5FCJ|1|7|U|33
5FCJ|1|7|C|34
5FCJ|1|7|C|35
5FCJ|1|7|C|36
*
5FCJ|1|7|G|41
5FCJ|1|7|A|42
5FCJ|1|7|U|43
5FCJ|1|7|C|44
5FCJ|1|7|A|45
Current chains
- Chain 7
- 5S ribosomal RNA
Nearby chains
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain l5
- 60S ribosomal protein L5
- Chain m1
- 60S ribosomal protein L11-A
- Chain sM
- Suppressor protein STM1,Suppressor protein STM1,Suppressor protein STM1,Suppressor protein STM1,Suppressor protein STM1
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