IL_5FLX_076
3D structure
- PDB id
- 5FLX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 40S HCV-IRES complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- ACUAG*CUUCU
- Length
- 10 nucleotides
- Bulged bases
- 5FLX|1|1|C|1403, 5FLX|1|1|U|1404
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5FLX_076 not in the Motif Atlas
- Homologous match to IL_8CRE_459
- Geometric discrepancy: 0.2021
- The information below is about IL_8CRE_459
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5FLX|1|1|A|1402
5FLX|1|1|C|1403
5FLX|1|1|U|1404
5FLX|1|1|A|1405
5FLX|1|1|G|1406
*
5FLX|1|1|C|1440
5FLX|1|1|U|1441
5FLX|1|1|U|1442
5FLX|1|1|C|1443
5FLX|1|1|U|1444
Current chains
- Chain 1
- 18S RRNA
Nearby chains
- Chain D
- 40S RIBOSOMAL PROTEIN S3
- Chain Q
- 40S RIBOSOMAL PROTEIN S16
- Chain U
- 40S RIBOSOMAL PROTEIN S20
Coloring options: