IL_5FLX_116
3D structure
- PDB id
- 5FLX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 40S HCV-IRES complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GCUCAGCGUG*CCGUUGAACCC
- Length
- 21 nucleotides
- Bulged bases
- 5FLX|1|1|U|1585, 5FLX|1|1|G|1587
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5FLX|1|1|G|1541
5FLX|1|1|C|1542
5FLX|1|1|U|1543
5FLX|1|1|C|1544
5FLX|1|1|A|1545
5FLX|1|1|G|1546
5FLX|1|1|C|1547
5FLX|1|1|G|1548
5FLX|1|1|U|1549
5FLX|1|1|G|1550
*
5FLX|1|1|C|1582
5FLX|1|1|C|1583
5FLX|1|1|G|1584
5FLX|1|1|U|1585
5FLX|1|1|U|1586
5FLX|1|1|G|1587
5FLX|1|1|A|1588
5FLX|1|1|A|1589
5FLX|1|1|C|1590
5FLX|1|1|C|1591
5FLX|1|1|C|1592
Current chains
- Chain 1
- 18S RRNA
Nearby chains
- Chain D
- 40S RIBOSOMAL PROTEIN S3
- Chain F
- 40S RIBOSOMAL PROTEIN S5
- Chain Q
- 40S RIBOSOMAL PROTEIN S16
- Chain T
- 40S RIBOSOMAL PROTEIN S19
- Chain U
- 40S RIBOSOMAL PROTEIN S20
- Chain Z
- 40S RIBOSOMAL PROTEIN S25
- Chain d
- 40S RIBOSOMAL PROTEIN S29
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