IL_5G2X_010

3D structure

PDB id

5G2X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure a of Group II Intron Complexed with its Reverse Transcriptase

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CCUAAACAA*UUGCAAG

Length

16 nucleotides

Bulged bases

5G2X|1|A|A|402

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_05918.1

Basepair signature

cWW-cWW-L-R-R-L-cWW-L-R-cWW-cWW

Number of instances in this motif group

4

Unit IDs

5G2X|1|A|C|397
5G2X|1|A|C|398
5G2X|1|A|U|399
5G2X|1|A|A|400
5G2X|1|A|A|401
5G2X|1|A|A|402
5G2X|1|A|C|403
5G2X|1|A|A|404
5G2X|1|A|A|405
*
5G2X|1|A|U|458
5G2X|1|A|U|459
5G2X|1|A|G|460
5G2X|1|A|C|461
5G2X|1|A|A|462
5G2X|1|A|A|463
5G2X|1|A|G|464

Current chains

Chain A

GROUP II INTRON

Nearby chains