IL_5G2X_019

3D structure

PDB id

5G2X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure a of Group II Intron Complexed with its Reverse Transcriptase

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GCAAACCAGUCA*UGAACAAGGCGGU

Length

25 nucleotides

Bulged bases

5G2X|1|A|C|2469, 5G2X|1|A|A|2470, 5G2X|1|A|A|2471

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5G2X|1|A|G|2445
5G2X|1|A|C|2446
5G2X|1|A|A|2447
5G2X|1|A|A|2448
5G2X|1|A|A|2449
5G2X|1|A|C|2450
5G2X|1|A|C|2451
5G2X|1|A|A|2452
5G2X|1|A|G|2453
5G2X|1|A|U|2454
5G2X|1|A|C|2455
5G2X|1|A|A|2456
*
5G2X|1|A|U|2465
5G2X|1|A|G|2466
5G2X|1|A|A|2467
5G2X|1|A|A|2468
5G2X|1|A|C|2469
5G2X|1|A|A|2470
5G2X|1|A|A|2471
5G2X|1|A|G|2472
5G2X|1|A|G|2473
5G2X|1|A|C|2474
5G2X|1|A|G|2475
5G2X|1|A|G|2476
5G2X|1|A|U|2477

Current chains

Chain A

GROUP II INTRON

Nearby chains