IL_5GAK_092
3D structure
- PDB id
- 5GAK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 60S ribosomal subunit with A-site tRNA, P-site tRNA and eIF-5A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.88 Å
Loop
- Sequence
- UCAAAGUG*CAACCAAG
- Length
- 16 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5GAK|1|1|U|2211
5GAK|1|1|C|2212
5GAK|1|1|A|2213
5GAK|1|1|A|2214
5GAK|1|1|A|2215
5GAK|1|1|G|2216
5GAK|1|1|U|2217
5GAK|1|1|G|2218
*
5GAK|1|1|C|2227
5GAK|1|1|A|2228
5GAK|1|1|A|2229
5GAK|1|1|C|2230
5GAK|1|1|C|2231
5GAK|1|1|A|2232
5GAK|1|1|A|2233
5GAK|1|1|G|2234
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain C
- 60S ribosomal protein L42-A
- Chain k
- 60S ribosomal protein L36-A
- Chain r
- ribosomal protein RPL1
Coloring options: