IL_5H4P_150

3D structure

PDB id

5H4P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural snapshot of cytoplasmic pre-60S ribosomal particles bound with Nmd3, Lsg1, Tif6 and Reh1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.07 Å

Loop

Sequence

AUUAUG*CAGAAU

Length

12 nucleotides

Bulged bases

5H4P|1|1|A|3130

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5H4P|1|1|A|3103
5H4P|1|1|U|3104
5H4P|1|1|U|3105
5H4P|1|1|A|3106
5H4P|1|1|U|3107
5H4P|1|1|G|3108
*
5H4P|1|1|C|3126
5H4P|1|1|A|3127
5H4P|1|1|G|3128
5H4P|1|1|A|3129
5H4P|1|1|A|3130
5H4P|1|1|U|3131

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain H

60S ribosomal protein L9-A

Chain O

60S ribosomal protein L16-A