IL_5H5U_174
3D structure
- PDB id
- 5H5U (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mechanistic insights into the alternative translation termination by ArfA and RF2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.01 Å
Loop
- Sequence
- CCG*CAAG
- Length
- 7 nucleotides
- Bulged bases
- 5H5U|1|h|C|1400, 5H5U|1|h|A|1503
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5H5U_174 not in the Motif Atlas
- Homologous match to IL_5J7L_058
- Geometric discrepancy: 0.0496
- The information below is about IL_5J7L_058
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_61438.4
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 4
Unit IDs
5H5U|1|h|C|1399
5H5U|1|h|C|1400
5H5U|1|h|G|1401
*
5H5U|1|h|C|1501
5H5U|1|h|A|1502
5H5U|1|h|A|1503
5H5U|1|h|G|1504
Current chains
- Chain h
- 16S rRNA
Nearby chains
- Chain 3
- Alternative ribosome-rescue factor A
- Chain 4
- Peptide chain release factor 2
- Chain 5
- Transfer RNA; tRNA
- Chain 7
- mRNA
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