IL_5HAU_042
3D structure
- PDB id
- 5HAU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CAG*CUG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary: CAG,CUG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5HAU_042 not in the Motif Atlas
- Geometric match to IL_3GM7_005
- Geometric discrepancy: 0.1774
- The information below is about IL_3GM7_005
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_87907.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 179
Unit IDs
5HAU|1|1A|C|1098
5HAU|1|1A|A|1099
5HAU|1|1A|G|1100
*
5HAU|1|1A|C|1149
5HAU|1|1A|U|1150
5HAU|1|1A|G|1151
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 1J
- 50S ribosomal protein L10
Coloring options: