IL_5HAU_104
3D structure
- PDB id
- 5HAU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CUAGUAC*GGACCG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5HAU_104 not in the Motif Atlas
- Homologous match to IL_7RQB_103
- Geometric discrepancy: 0.0534
- The information below is about IL_7RQB_103
- Detailed Annotation
- Sarcin-Ricin target in LSU H95; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_16458.1
- Basepair signature
- cWW-L-R-L-R-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 7
Unit IDs
5HAU|1|1A|C|2663
5HAU|1|1A|U|2664
5HAU|1|1A|A|2665
5HAU|1|1A|G|2666
5HAU|1|1A|U|2667
5HAU|1|1A|A|2668
5HAU|1|1A|C|2669
*
5HAU|1|1A|G|2674
5HAU|1|1A|G|2675
5HAU|1|1A|A|2676
5HAU|1|1A|C|2677
5HAU|1|1A|C|2678
5HAU|1|1A|G|2679
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 1H
- 50S ribosomal protein L6
- Chain 1z
- Chimera protein of 50S ribosomal protein L9 and Elongation factor G
Coloring options: