IL_5HAU_342
3D structure
- PDB id
- 5HAU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CAGC*GG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5HAU_342 not in the Motif Atlas
- Homologous match to IL_4LFB_049
- Geometric discrepancy: 0.2977
- The information below is about IL_4LFB_049
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_15052.4
- Basepair signature
- cWW-L-cWW-L
- Number of instances in this motif group
- 8
Unit IDs
5HAU|1|2a|C|1112
5HAU|1|2a|A|1113
5HAU|1|2a|G|1114
5HAU|1|2a|C|1115
*
5HAU|1|2a|G|1125
5HAU|1|2a|G|1126
Current chains
- Chain 2a
- 16S Ribosomal RNA
Nearby chains
- Chain 2i
- 30S ribosomal protein S9
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