IL_5HAU_362
3D structure
- PDB id
- 5HAU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GGAGAG*UGGUC
- Length
- 11 nucleotides
- Bulged bases
- 5HAU|1|1a|A|649
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5HAU_362 not in the Motif Atlas
- Geometric match to IL_8D29_010
- Geometric discrepancy: 0.3871
- The information below is about IL_8D29_010
- Detailed Annotation
- Partly complementary
- Broad Annotation
- Partly complementary
- Motif group
- IL_49751.4
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 16
Unit IDs
5HAU|1|1a|G|645
5HAU|1|1a|G|646
5HAU|1|1a|A|647
5HAU|1|1a|G|648
5HAU|1|1a|A|649
5HAU|1|1a|G|650
*
5HAU|1|1a|U|724
5HAU|1|1a|G|725
5HAU|1|1a|G|726
5HAU|1|1a|U|727
5HAU|1|1a|C|728
Current chains
- Chain 1a
- 16S Ribosomal RNA
Nearby chains
- Chain 1f
- 30S ribosomal protein S6
- Chain 1o
- 30S ribosomal protein S15
- Chain 1r
- 30S ribosomal protein S18
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