IL_5IMQ_033
3D structure
- PDB id
- 5IMQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ribosome bound to cofactor at 3.8 angstrom resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GCAC*GUUCCC
- Length
- 10 nucleotides
- Bulged bases
- 5IMQ|1|A|C|934
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5IMQ_033 not in the Motif Atlas
- Homologous match to IL_6CZR_149
- Geometric discrepancy: 0.244
- The information below is about IL_6CZR_149
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_93211.1
- Basepair signature
- cWW-cWS-cWW-L-R-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
5IMQ|1|A|G|933
5IMQ|1|A|C|934
5IMQ|1|A|A|935
5IMQ|1|A|C|936
*
5IMQ|1|A|G|1379
5IMQ|1|A|U|1380
5IMQ|1|A|U|1381
5IMQ|1|A|C|1382
5IMQ|1|A|C|1383
5IMQ|1|A|C|1384
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain 4
- Transfer RNA; tRNA
- Chain 5
- Transfer RNA; tRNA
- Chain K
- 30S ribosomal protein S7
- Chain M
- 30S ribosomal protein S9
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