IL_5IMR_010

3D structure

PDB id

5IMR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosome bound to cofactor at 5.7 angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

5.7 Å

Loop

Sequence

GACAAC*GCUAAUC

Length

13 nucleotides

Bulged bases

5IMR|1|A|U|173

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5IMR|1|A|G|148
5IMR|1|A|A|149
5IMR|1|A|C|150
5IMR|1|A|A|151
5IMR|1|A|A|152
5IMR|1|A|C|153
*
5IMR|1|A|G|168
5IMR|1|A|C|169
5IMR|1|A|U|170
5IMR|1|A|A|171
5IMR|1|A|A|172
5IMR|1|A|U|173
5IMR|1|A|C|174

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain X

30S ribosomal protein S20