IL_5IMR_012

3D structure

PDB id

5IMR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosome bound to cofactor at 5.7 angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

5.7 Å

Loop

Sequence

CAUCAGC*GCGACGACG

Length

16 nucleotides

Bulged bases

5IMR|1|A|U|244, 5IMR|1|A|C|280

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5IMR|1|A|C|242
5IMR|1|A|A|243
5IMR|1|A|U|244
5IMR|1|A|C|245
5IMR|1|A|A|246
5IMR|1|A|G|247
5IMR|1|A|C|248
*
5IMR|1|A|G|276
5IMR|1|A|C|277
5IMR|1|A|G|278
5IMR|1|A|A|279
5IMR|1|A|C|280
5IMR|1|A|G|281
5IMR|1|A|A|282
5IMR|1|A|C|283
5IMR|1|A|G|284

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain P

30S ribosomal protein S12

Chain U

30S ribosomal protein S17