IL_5IMR_031

3D structure

PDB id

5IMR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosome bound to cofactor at 5.7 angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

5.7 Å

Loop

Sequence

GAGUAGC*GCGCAGAUAC

Length

17 nucleotides

Bulged bases

5IMR|1|A|A|702

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5IMR|1|A|G|683
5IMR|1|A|A|684
5IMR|1|A|G|685
5IMR|1|A|U|686
5IMR|1|A|A|687
5IMR|1|A|G|688
5IMR|1|A|C|689
*
5IMR|1|A|G|698
5IMR|1|A|C|699
5IMR|1|A|G|700
5IMR|1|A|C|701
5IMR|1|A|A|702
5IMR|1|A|G|703
5IMR|1|A|A|704
5IMR|1|A|U|705
5IMR|1|A|A|706
5IMR|1|A|C|707

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain D

Large subunit ribosomal RNA; LSU rRNA

Chain O

30S ribosomal protein S11