IL_5IMR_033

3D structure

PDB id

5IMR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosome bound to cofactor at 5.7 angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

5.7 Å

Loop

Sequence

CAAACCGG*CCGGGUAG

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5IMR|1|A|C|779
5IMR|1|A|A|780
5IMR|1|A|A|781
5IMR|1|A|A|782
5IMR|1|A|C|783
5IMR|1|A|C|784
5IMR|1|A|G|785
5IMR|1|A|G|786
*
5IMR|1|A|C|796
5IMR|1|A|C|797
5IMR|1|A|G|798
5IMR|1|A|G|799
5IMR|1|A|G|800
5IMR|1|A|U|801
5IMR|1|A|A|802
5IMR|1|A|G|803

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain D

Large subunit ribosomal RNA; LSU rRNA

Chain O

30S ribosomal protein S11

Chain a

50S ribosomal protein L2