IL_5IMR_044
3D structure
- PDB id
- 5IMR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ribosome bound to cofactor at 5.7 angstrom resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.7 Å
Loop
- Sequence
- GUC*GUC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5IMR_044 not in the Motif Atlas
- Geometric match to IL_5D0B_001
- Geometric discrepancy: 0.2759
- The information below is about IL_5D0B_001
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_87907.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 179
Unit IDs
5IMR|1|A|G|1061
5IMR|1|A|U|1062
5IMR|1|A|C|1063
*
5IMR|1|A|G|1193
5IMR|1|A|U|1194
5IMR|1|A|C|1195
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain G
- 30S ribosomal protein S3
- Chain I
- 30S ribosomal protein S5
- Chain M
- 30S ribosomal protein S9
- Chain N
- 30S ribosomal protein S10
- Chain R
- 30S ribosomal protein S14 type Z
Coloring options: