IL_5IMR_050

3D structure

PDB id

5IMR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosome bound to cofactor at 5.7 angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

5.7 Å

Loop

Sequence

GGAGCGG*CCGUGAC

Length

14 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5IMR|1|A|G|1416
5IMR|1|A|G|1417
5IMR|1|A|A|1418
5IMR|1|A|G|1419
5IMR|1|A|C|1420
5IMR|1|A|G|1421
5IMR|1|A|G|1422
*
5IMR|1|A|C|1478
5IMR|1|A|C|1479
5IMR|1|A|G|1480
5IMR|1|A|U|1481
5IMR|1|A|G|1482
5IMR|1|A|A|1483
5IMR|1|A|C|1484

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain D

Large subunit ribosomal RNA; LSU rRNA

Chain P

30S ribosomal protein S12

Chain g

50S ribosomal protein L14