IL_5IMR_115

3D structure

PDB id

5IMR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosome bound to cofactor at 5.7 angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

5.7 Å

Loop

Sequence

CUGUGAACC*GGGGAG

Length

15 nucleotides

Bulged bases

5IMR|1|D|G|2131, 5IMR|1|D|G|2133, 5IMR|1|D|A|2135, 5IMR|1|D|G|2156, 5IMR|1|D|G|2157

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5IMR|1|D|C|2129
5IMR|1|D|U|2130
5IMR|1|D|G|2131
5IMR|1|D|U|2132
5IMR|1|D|G|2133
5IMR|1|D|A|2134
5IMR|1|D|A|2135
5IMR|1|D|C|2136
5IMR|1|D|C|2137
*
5IMR|1|D|G|2154
5IMR|1|D|G|2155
5IMR|1|D|G|2156
5IMR|1|D|G|2157
5IMR|1|D|A|2158
5IMR|1|D|G|2159

Current chains

Chain D

23S ribosomal RNA

Nearby chains

Chain Z

50S ribosomal protein L1