IL_5IMR_118
3D structure
- PDB id
- 5IMR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ribosome bound to cofactor at 5.7 angstrom resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.7 Å
Loop
- Sequence
- UCC*GG
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5IMR_118 not in the Motif Atlas
- Homologous match to IL_7A0S_082
- Geometric discrepancy: 0.3239
- The information below is about IL_7A0S_082
- Detailed Annotation
- Major groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_48076.7
- Basepair signature
- cWW-cSH-cWW
- Number of instances in this motif group
- 40
Unit IDs
5IMR|1|D|U|2401
5IMR|1|D|C|2402
5IMR|1|D|C|2403
*
5IMR|1|D|G|2414
5IMR|1|D|G|2415
Current chains
- Chain D
- 23S ribosomal RNA
Nearby chains
- Chain h
- 50S ribosomal protein L15
- Chain v
- 50S ribosomal protein L31
- Chain x
- 50S ribosomal protein L33
- Chain z
- 50S ribosomal protein L35
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