IL_5IMR_123

3D structure

PDB id

5IMR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosome bound to cofactor at 5.7 angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

5.7 Å

Loop

Sequence

CGUCG*CGGCACG

Length

12 nucleotides

Bulged bases

5IMR|1|D|A|2572, 5IMR|1|D|C|2573

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5IMR|1|D|C|2512
5IMR|1|D|G|2513
5IMR|1|D|U|2514
5IMR|1|D|C|2515
5IMR|1|D|G|2516
*
5IMR|1|D|C|2568
5IMR|1|D|G|2569
5IMR|1|D|G|2570
5IMR|1|D|C|2571
5IMR|1|D|A|2572
5IMR|1|D|C|2573
5IMR|1|D|G|2574

Current chains

Chain D

23S ribosomal RNA

Nearby chains

Chain C

Elongation factor 4

Chain b

50S ribosomal protein L3

Chain f

50S ribosomal protein L13