IL_5IMR_126

3D structure

PDB id

5IMR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosome bound to cofactor at 5.7 angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

5.7 Å

Loop

Sequence

GCUUGAG*CAAGAUGAGGC

Length

18 nucleotides

Bulged bases

5IMR|1|D|G|2777, 5IMR|1|D|U|2779, 5IMR|1|D|G|2780

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5IMR|1|D|G|2634
5IMR|1|D|C|2635
5IMR|1|D|U|2636
5IMR|1|D|U|2637
5IMR|1|D|G|2638
5IMR|1|D|A|2639
5IMR|1|D|G|2640
*
5IMR|1|D|C|2774
5IMR|1|D|A|2775
5IMR|1|D|A|2776
5IMR|1|D|G|2777
5IMR|1|D|A|2778
5IMR|1|D|U|2779
5IMR|1|D|G|2780
5IMR|1|D|A|2781
5IMR|1|D|G|2782
5IMR|1|D|G|2783
5IMR|1|D|C|2784

Current chains

Chain D

23S ribosomal RNA

Nearby chains

Chain b

50S ribosomal protein L3

Chain f

50S ribosomal protein L13